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1

Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering

Matthias Hackl, Tobias Jakobi, Jochen Blom, Daniel Doppmeier, Karina Brinkrolf, Rafael Szczepanowski, Stephan H. Bernhart, Christian Höner zu Siederdissen, Juan A. Hernandez Bort, Matthias Wieser, Ren

Journal:

Journal of Biotechnology

Year:

2011

Language:

english

File:

PDF, 1.81 MB

english, 2011

2

Integrating cross-border emergency medicine systems: securing future pre-clinical medical workforce for remote medical services

Ucinski, Tomasz, Dolata, Gregorz, Helminiak, Robert, Fischer, Lutz, Fleßa, Steffen, Brehmer, Bernhard, Vierth, Armin, Grundmann, Volker, Rehberg, Sebastian, Krügel, Kathrin, Partecke, Maud, Brinkrolf,

Journal:

Best Practice & Research Clinical Anaesthesiology

Year:

2018

Language:

english

File:

PDF, 237 KB

english, 2018

3

Sepsis erkennen im Rettungsdienst; Sepsis detection in emergency medicine;

Metelmann, C., Metelmann, B., Scheer, C., Gründling, M., Henkel, B., Hahnenkamp, K., Brinkrolf, P.

Journal:

Der Anaesthesist

Year:

2018

Language:

german

File:

PDF, 860 KB

german, 2018

4

The lifestyle of Corynebacterium urealyticum derived from its complete genome sequence established by pyrosequencing

Andreas Tauch, Eva Trost, Alexandra Tilker, Ulrike Ludewig, Susanne Schneiker, Alexander Goesmann, Walter Arnold, Thomas Bekel, Karina Brinkrolf, Iris Brune, Susanne Götker, Jörn Kalinowski, Paul-Bert

Journal:

Journal of Biotechnology

Year:

2008

Language:

english

File:

PDF, 991 KB

english, 2008

5

Chinese hamster genome sequenced from sorted chromosomes

Brinkrolf, Karina, Rupp, Oliver, Laux, Holger, Kollin, Florian, Ernst, Wolfgang, Linke, Burkhard, Kofler, Rudolf, Romand, Sandrine, Hesse, Friedemann, Budach, Wolfgang E, Galosy, Sybille, Müller, Deth

Journal:

Nature Biotechnology

Year:

2013

Language:

english

File:

PDF, 245 KB

english, 2013

6

Predicting ROSC in out-of-hospital cardiac arrest using expiratory carbon dioxide concentration: Is trend-detection instead of absolute threshold values the key?

Brinkrolf, Peter, Borowski, Matthias, Metelmann, Camilla, Lukas, Roman-Patrik, Pidde-Küllenberg, Laura, Bohn, Andreas

Journal:

Year:

2018

Language:

english

File:

PDF, 820 KB

english, 2018

7

Bystander-witnessed cardiac arrest is associated with reported agonal breathing and leads to less frequent bystander CPR

Brinkrolf, P., Metelmann, B., Scharte, C., Zarbock, A., Hahnenkamp, K., Bohn, A.

Journal:

Year:

2018

Language:

english

File:

PDF, 679 KB

english, 2018

8

Interpretable machine learning with reject option

Brinkrolf, Johannes, Hammer, Barbara

Journal:

at - Automatisierungstechnik

Year:

2018

Language:

english

File:

PDF, 11.90 MB

english, 2018

9

A high proportion of bone marrow T cells with regulatory phenotype (CD4+CD25hiFoxP3+) in Ewing sarcoma patients is associated with metastatic disease

Peter Brinkrolf, Silke Landmeier, Bianca Altvater, Christiane Chen, Sibylle Pscherer, Annegret Rosemann, Andreas Ranft, Uta Dirksen, Heribert Juergens, Claudia Rossig

Journal:

International Journal of Cancer

Year:

2009

Language:

english

File:

PDF, 281 KB

english, 2009

10

Ultrafast pyrosequencing of Corynebacterium kroppenstedtii DSM44385 revealed insights into the physiology of a lipophilic corynebacterium that lacks mycolic acids

Andreas Tauch, Jessica Schneider, Rafael Szczepanowski, Alexandra Tilker, Prisca Viehoever, Karl-Heinz Gartemann, Walter Arnold, Jochen Blom, Karina Brinkrolf, Iris Brune, Susanne Götker, Bernd Weissh

Journal:

Journal of Biotechnology

Year:

2008

Language:

english

File:

PDF, 1.62 MB

english, 2008

11

The transcriptional regulatory repertoire of Corynebacterium glutamicum: Reconstruction of the network controlling pathways involved in lysine and glutamate production

Karina Brinkrolf, Jasmin Schröder, Alfred Pühler, Andreas Tauch

Journal:

Journal of Biotechnology

Year:

2010

Language:

english

File:

PDF, 663 KB

english, 2010

12

RAPYD — Rapid Annotation Platform for Yeast Data

Jessica Schneider, Jochen Blom, Sebastian Jaenicke, Burkhard Linke, Karina Brinkrolf, Heiko Neuweger, Andreas Tauch, Alexander Goesmann

Journal:

Journal of Biotechnology

Year:

2011

Language:

english

File:

PDF, 1.96 MB

english, 2011

13

High-quality genome sequence of Pichia pastoris CBS7435

Andreas Küberl, Jessica Schneider, Gerhard G. Thallinger, Ingund Anderl, Daniel Wibberg, Tanja Hajek, Sebastian Jaenicke, Karina Brinkrolf, Alexander Goesmann, Rafael Szczepanowski, Alfred Pühler, Hel

Journal:

Journal of Biotechnology

Year:

2011

Language:

english

File:

PDF, 1.02 MB

english, 2011

14

The adenine nucleotide content of rat liver during infusions of carbohydrates and polyols

H. Brinkrolf, K. H. Bässler

Journal:

European Journal of Nutrition

Year:

1972

Language:

english

File:

PDF, 280 KB

english, 1972

15

Die Rolle von Oxalacetat bei der gesteigerten Ketogenese und beim antiketogenen Effekt

K. H. Bässler, H. Brinkrolf

Journal:

Research in Experimental Medicine

Year:

1971

File:

PDF, 458 KB

1971

16

Utilization and evaluation of CHO-specific sequence databases for mass spectrometry based proteomics

Paula Meleady, Raimund Hoffrogge, Michael Henry, Oliver Rupp, Juan Hernandez Bort, Colin Clarke, Karina Brinkrolf, Shane Kelly, Benjamin Müller, Padraig Doolan, Matthias Hackl, Tim Frederik Beckmann,

Journal:

Biotechnology and Bioengineering

Year:

2012

Language:

english

File:

PDF, 373 KB

english, 2012

17

Genome sequence of Wickerhamomyces anomalus DSM 6766 reveals genetic basis of biotechnologically important antimicrobial activities

Jessica Schneider, Oliver Rupp, Eva Trost, Sebastian Jaenicke, Volkmar Passoth, Alexander Goesmann, Andreas Tauch, Karina Brinkrolf

Journal:

FEMS Yeast Research

Year:

2012

Language:

english

File:

PDF, 199 KB

english, 2012

18

The individual and common repertoire of DNA-binding transcriptional regulators ofCorynebacterium glutamicum,Corynebacterium efficiens,Corynebacterium diphtheriaeandCorynebacterium jeikeiumdeduced from the complete genome sequences

Iris Brune, Karina Brinkrolf, Jörn Kalinowski, Alfred Pühler, Andreas Tauch

Journal:

Year:

2005

Language:

english

File:

PDF, 795 KB

english, 2005

19

CoryneRegNet: An ontology-based data warehouse of corynebacterial transcription factors and regulatory networks

Jan Baumbach, Karina Brinkrolf, Lisa F Czaja, Sven Rahmann, Andreas Tauch

Journal:

Year:

2006

Language:

english

File:

PDF, 2.19 MB

english, 2006

20

The transcriptional regulatory network of the amino acid producer Corynebacterium glutamicum

Karina Brinkrolf, Iris Brune, Andreas Tauch

Journal:

Journal of Biotechnology

Year:

2007

Language:

english

File:

PDF, 1.24 MB

english, 2007

21

CoryneRegNet 3.0—An interactive systems biology platform for the analysis of gene regulatory networks in corynebacteria and Escherichia coli

Jan Baumbach, Tobias Wittkop, Katrin Rademacher, Sven Rahmann, Karina Brinkrolf, Andreas Tauch

Journal:

Journal of Biotechnology

Year:

2007

Language:

english

File:

PDF, 1.35 MB

english, 2007

22

Computational identification of microRNA gene loci and precursor microRNA sequences in CHO cell lines

Matthias Hackl, Vaibhav Jadhav, Tobias Jakobi, Oliver Rupp, Karina Brinkrolf, Alexander Goesmann, Alfred Pühler, Thomas Noll, Nicole Borth, Johannes Grillari

Journal:

Journal of Biotechnology

Year:

2012

Language:

english

File:

PDF, 774 KB

english, 2012

23

Transcriptome analyses of CHO cells with the next-generation microarray CHO41K: Development and validation by analysing the influence of the growth stimulating substance IGF-1 substitute LongR3

Becker, Jennifer, Timmermann, Christina, Rupp, Oliver, Albaum, Stefan P., Brinkrolf, Karina, Goesmann, Alexander, Pühler, Alfred, Tauch, Andreas, Noll, Thomas

Journal:

Journal of Biotechnology

Year:

2014

Language:

english

File:

PDF, 1.35 MB

english, 2014

24

Impact of a public awareness campaign promoting bystander-CPR: Results from a representative survey

Brinkrolf, Peter, Lukas, Roman, Bohn, Andreas, Heyse, Marko, Dierschke, Thomas, Van Aken, Hugo, Hahnenkamp, Klaus

Journal:

Year:

2014

Language:

english

File:

PDF, 61 KB

english, 2014

25

Draft Genome Sequence of Turicella otitidis ATCC 51513, Isolated from Middle Ear Fluid from a Child with Otitis Media

Brinkrolf, K., Schneider, J., Knecht, M., Ruckert, C., Tauch, A.

Journal:

Journal of Bacteriology

Year:

2012

Language:

english

File:

PDF, 156 KB

english, 2012

26

Genetic makeup of the Corynebacterium glutamicum LexA regulon deduced from comparative transcriptomics and in vitro DNA band shift assays

Jochmann, N., Kurze, A.-K., Czaja, L. F., Brinkrolf, K., Brune, I., Huser, A. T., Hansmeier, N., Puhler, A., Borovok, I., Tauch, A.

Journal:

Microbiology (Society for General Microbiology)

Year:

2009

Language:

english

File:

PDF, 848 KB

english, 2009

27

Discovery of transcription start sites in the Chinese hamster genome by next-generation RNA sequencing

Jakobi, Tobias, Brinkrolf, Karina, Tauch, Andreas, Noll, Thomas, Stoye, Jens, Pühler, Alfred, Goesmann, Alexander

Journal:

Journal of Biotechnology

Year:

2014

Language:

english

File:

PDF, 3.43 MB

english, 2014

28

The IclR-Type Transcriptional Repressor LtbR Regulates the Expression of Leucine and Tryptophan Biosynthesis Genes in the Amino Acid Producer Corynebacterium glutamicum

Brune, I., Jochmann, N., Brinkrolf, K., Huser, A. T., Gerstmeir, R., Eikmanns, B. J., Kalinowski, J., Puhler, A., Tauch, A.

Journal:

Journal of Bacteriology

Year:

2007

Language:

english

File:

PDF, 382 KB

english, 2007

29

The LacI/GalR family transcriptional regulator UriR negatively controls uridine utilization of Corynebacterium glutamicum by binding to catabolite-responsive element (cre)-like sequences

Brinkrolf, K., Ploger, S., Solle, S., Brune, I., Nentwich, S. S., Huser, A. T., Kalinowski, J., Puhler, A., Tauch, A.

Journal:

Microbiology (Society for General Microbiology)

Year:

2008

Language:

english

File:

PDF, 393 KB

english, 2008

30

Characterization of the LacI-type transcriptional repressor RbsR controlling ribose transport in Corynebacterium glutamicum ATCC 13032

Nentwich, S. S., Brinkrolf, K., Gaigalat, L., Huser, A. T., Rey, D. A., Mohrbach, T., Marin, K., Puhler, A., Tauch, A., Kalinowski, J.

Journal:

Microbiology (Society for General Microbiology)

Year:

2009

Language:

english

File:

PDF, 603 KB

english, 2009

31

Einsatz des Larynxtubus durch Rettungsassistenten reduziert Unterbrechungen der Reanimation

Lukas, R.-P., Wecker, S., Steffler, C., Brinkrolf, P., Sauerland, C., Van Aken, H., Bohn, A.

Journal:

Notfall + Rettungsmedizin

Year:

2015

Language:

german

File:

PDF, 446 KB

german, 2015

32

Systemic lidocaine in surgical procedures

Brinkrolf, Peter, Hahnenkamp, Klaus

Journal:

Current Opinion in Anaesthesiology

Year:

2014

Language:

english

File:

PDF, 205 KB

english, 2014

33

Draft Genome Sequence of Wickerhamomyces ciferrii NRRL Y-1031 F-60-10

Schneider, J., Andrea, H., Blom, J., Jaenicke, S., Ruckert, C., Schorsch, C., Szczepanowski, R., Farwick, M., Goesmann, A., Puhler, A., Schaffer, S., Tauch, A., Kohler, T., Brinkrolf, K.

Journal:

Eukaryotic Cell

Year:

2012

Language:

english

File:

PDF, 94 KB

english, 2012

34

High Proportions of CD4+ T Cells among Residual Bone Marrow T Cells in Childhood Acute Lymphoblastic Leukemia Are Associated with Favorable Early Responses

Lustfeld, Imke, Altvater, Bianca, Ahlmann, Martina, Ligges, Sandra, Brinkrolf, Peter, Rosemann, Annegret, Moericke, Anja, Rossig, Claudia

Journal:

Acta Haematologica

Year:

2014

Language:

english

File:

PDF, 609 KB

english, 2014

35

The structure of the Cyberlindnera jadinii genome and its relation to Candida utilis analyzed by the occurrence of single nucleotide polymorphisms

Rupp, Oliver, Brinkrolf, Karina, Buerth, Christoph, Kunigo, Maya, Schneider, Jessica, Jaenicke, Sebastian, Goesmann, Alexander, Pühler, Alfred, Jaeger, Karl-Erich, Ernst, Joachim F.

Journal:

Journal of Biotechnology

Year:

2015

Language:

english

File:

PDF, 2.46 MB

english, 2015

36

The DNA methylation landscape of Chinese hamster ovary (CHO) DP-12 cells

Wippermann, Anna, Rupp, Oliver, Brinkrolf, Karina, Hoffrogge, Raimund, Noll, Thomas

Journal:

Journal of Biotechnology

Year:

2015

Language:

english

File:

PDF, 1.06 MB

english, 2015

37

Whole-Genome Sequence of the Clinical Strain Corynebacterium argentoratense DSM 44202, Isolated from a Human Throat Specimen

Bomholt, C., Glaub, A., Gravermann, K., Albersmeier, A., Brinkrolf, K., Ruckert, C., Tauch, A.

Journal:

Genome Announcements

Year:

2013

Language:

english

File:

PDF, 133 KB

english, 2013

38

Laienreanimation - Alles ist besser, als nichts zu tun

H. Van Aken, P. Brinkrolf

Year:

2013

Language:

german

File:

PDF, 1.31 MB

german, 2013

39

Invasive Pilzinfektionen

A. Uekötter, P. Brinkrolf, K. Hahnenkamp

Year:

2013

Language:

german

File:

PDF, 418 KB

german, 2013

40

Weiterbildung – Wandel der Werte und Wissensvermittlung

Hahnenkamp, Klaus, Brinkrolf, Peter, Wenning, Markus, Hasebrook, Joachim

Journal:

AINS - Anästhesiologie · Intensivmedizin · Notfallmedizin · Schmerztherapie

Year:

2013

Language:

german

File:

PDF, 699 KB

german, 2013

41

Medikationsfehler in der Intensivmedizin

Brinkrolf, Peter, Klaas, Christoph, Horn, Dagmar

Journal:

Intensivmedizin up2date

Year:

2015

Language:

german

File:

PDF, 362 KB

german, 2015

42

Bystander cardiopulmonary resuscitation: Willingness to help and awareness of correct procedure decline with age

Brinkrolf, Peter, Bohn, Andreas, Lukas, Roman, Heyse, Marko, Dierschke, Thomas, Van Aken, Hugo, Hahnenkamp, Klaus

Journal:

Year:

2015

Language:

english

File:

PDF, 140 KB

english, 2015

43

Complete Genome Sequence and Annotation of Corynebacterium singulare DSM 44357, Isolated from a Human Semen Specimen

Merten, Madlen, Brinkrolf, Karina, Albersmeier, Andreas, Kutter, Yvonne, Rückert, Christian, Tauch, Andreas

Journal:

Genome Announcements

Year:

2015

Language:

english

File:

PDF, 165 KB

english, 2015

44

Complete Genome Sequence of Corynebacterium falsenii DSM 44353 To Study the Evolution of Corynebacterium Cluster 3 Species

Glaub, A., Bomholt, C., Gravermann, K., Brinkrolf, K., Albersmeier, A., Ruckert, C., Tauch, A.

Journal:

Genome Announcements

Year:

2014

Language:

english

File:

PDF, 138 KB

english, 2014

45

Übertragungsrisiko von MRSA auf Kontaktflächen im Krankentransport

Lukas, R.-P., Keppler, P.-A., Brinkrolf, P., Friedrich, A., Van Aken, H., Bohn, A.

Journal:

Year:

2015

File:

PDF, 317 KB

2015

46

Complete Genome Sequence of Corynebacterium ureicelerivorans DSM 45051, a Lipophilic and Urea-Splitting Isolate from the Blood Culture of a Septicemia Patient

Tippelt, A., Albersmeier, A., Brinkrolf, K., Ruckert, C., Fernandez-Natal, I., Soriano, F., Tauch, A.

Journal:

Genome Announcements

Year:

2014

Language:

english

File:

PDF, 160 KB

english, 2014

47

Integrative analysis of DNA methylation and gene expression in butyrate-treated CHO cells

Wippermann, Anna, Rupp, Oliver, Brinkrolf, Karina, Hoffrogge, Raimund, Noll, Thomas

Journal:

Journal of Biotechnology

Year:

2016

Language:

english

File:

PDF, 2.00 MB

english, 2016

48

Resuscitation Training for Schoolchildren Worldwide

Van Aken, Hugo, Hessler, Michael, Brinkrolf, Peter, Bohn, Andreas, Gottschalk, Antje

Journal:

Anesthesia & Analgesia

Year:

2017

Language:

english

File:

PDF, 448 KB

english, 2017

49

Efficient Kernelisation of Discriminative Dimensionality Reduction

Schulz, Alexander, Brinkrolf, Johannes, Hammer, Barbara

Journal:

Year:

2017

Language:

english

File:

PDF, 696 KB

english, 2017

50

Visualization and Analysis of MicroRNAs within KEGG Pathways using VANESA

Hamzeiy, Hamid, Suluyayla, Rabia, Brinkrolf, Christoph, Janowski, Sebastian Jan, Hofestaedt, Ralf, Allmer, Jens

Journal:

Journal of Integrative Bioinformatics

Year:

2017

Language:

english

File:

PDF, 3.87 MB

english, 2017

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